PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G009100.3.p
Common NamePRUPE_ppa006134mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 427aa    MW: 47695.9 Da    PI: 8.0994
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G009100.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.38.9e-11361406655
                         HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +++Er RR ri +++ +L++l P+     +k  + ae+L +Ave+Ik+Lq
  Prupe.2G009100.3.p 361 SIAERMRRTRISERMKKLQDLFPNM----DKQINTAEMLDLAVEFIKDLQ 406
                         689*********************7....688*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.764355405IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.97E-14358418IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.11E-10359410No hitNo description
Gene3DG3DSA:4.10.280.107.0E-13360414IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.7E-8361406IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.1E-11361411IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 427 aa     Download sequence    Send to blast
MSSLLYKYNP NFKCSEAELR KNHTEFMDSN IFQQQQLHQQ LQQPQQQSSG LMRYRSAPSS  60
FLMDLVDSNG GVGCEDSRYL RPSSPEVETV LARFISSCNE PDHHDNGANS LQHQFEERAV  120
KQEAGDSVSK QNGYSNSSHM MYQAQQVHAL DNNSFAAINS TGLENSMQSK IGVGNRSNLV  180
RQSSSPAGFF PDLTVDNGFN VMKDGASFRA GNGINGEASP SSTSRLNNQL NFSSGPSSYP  240
RRMPRIAEME NGNMGDGSQQ DQGLGNASNS HCISNFPNDS WDISSFNDLK RGRNNDGNKF  300
SNSTAFETQN NDFGHRNHGL THHLSLPKHF EMPAMEKLLQ FEESIPCKIR AKRGFATHPR  360
SIAERMRRTR ISERMKKLQD LFPNMDKQIN TAEMLDLAVE FIKDLQKQVK TLGDIKAKCS  420
CSSKQK*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007218047.10.0hypothetical protein PRUPE_ppa006134mg
RefseqXP_007218046.10.0hypothetical protein PRUPE_ppa006134mg
TrEMBLM5X1890.0M5X189_PRUPE; Uncharacterized protein
STRINGPOPTR_0009s06910.11e-134(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.11e-63bHLH family protein